STRINGSTRING
Zm.21100 protein (Zea mays) - STRING interaction network
"Zm.21100" - LOC100282782 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.21100LOC100282782 (260 aa)    
Predicted Functional Partners:
psbB
Photosystem II CP47 chlorophyll apoprotein (PSII 47 kDa protein)(Protein CP-47); One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (508 aa)
       
      0.884
rop1
Hypothetical protein LOC100216930 (451 aa)
       
      0.659
GTPase
GTPase protein (214 aa)
       
      0.659
umc2770
Hypothetical protein LOC100383569 (545 aa)
       
    0.616
pco076481
Hypothetical protein LOC100280067 (798 aa)
              0.503
AKHSDH2
Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic Precursor (AK-HSDH 2)(AK-HD 2) [Includes Aspartokinase(EC 2.7.2.4);Homoserine dehydrogenase(EC 1.1.1.3)] (917 aa)
              0.503
GRMZM5G866647_P01
Annotation not available (207 aa)
              0.448
GRMZM5G840928_P01
Hypothetical protein LOC100216749 (406 aa)
              0.448
cl754_1a
Hypothetical protein LOC100279553 (487 aa)
              0.448
GRMZM2G558123_P01
Annotation not available (91 aa)
              0.448
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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