STRINGSTRING
hag25 protein (Zea mays) - STRING interaction network
"hag25" - Hypothetical protein LOC100193024 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hag25Hypothetical protein LOC100193024 (194 aa)    
Predicted Functional Partners:
cl33241_1
LOC100283323 (285 aa)
           
  0.548
HAT1
Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48)(Histone acetyltransferase HAT B)(Histone acetyltransferase HAT-B-p50); Acetylates newly synthesized histones during DNA replication. Highly specific in vitro for the non-acetylated H4 which is acetylated sequentially at ’Lys-12’ and ’Lys-5’ into a di-acetylated form (468 aa)
           
  0.528
GNAT19
Silencing gene B 102 (174 aa)
           
  0.525
Zm.98042
Retrotransposon protein (201 aa)
     
   
  0.478
Zm.161642
N-alpha-acetyltransferase MAK3-like (195 aa)
     
   
  0.461
GNAT38
GNAT transcription factor (184 aa)
           
  0.428
Zm.152208
Uncharacterized LOC103625815 (195 aa)
           
  0.428
GNAT32
N-acetyltransferase (193 aa)
           
  0.428
GNAT4
GNAT transcription factor (193 aa)
           
  0.428
Zm.78597
Hypothetical protein LOC100192970 (LOC100192970), mRNA (422 aa)
           
  0.412
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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