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ereb126 protein (Zea mays) - STRING interaction network
"ereb126" - DNA-binding protein RAV1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ereb126DNA-binding protein RAV1 (389 aa)    
Predicted Functional Partners:
GRMZM2G413113_P01
annotation not available (464 aa)
           
  0.733
GRMZM2G410797_P01
Putative phototropic-resoponsive NPH3 family protein ; Belongs to the NPH3 family (158 aa)
           
  0.733
GRMZM2G119828_P01
annotation not available (378 aa)
           
  0.733
100192592
DNA excision repair protein ERCC-1 (397 aa)
           
  0.731
100383376
DNA-binding protein-like (545 aa)
           
  0.731
THX25
Putative homeodomain-like transcription factor superfamily protein; Uncharacterized protein (379 aa)
       
 
  0.646
103636373
Histone deacetylase HDT1 (285 aa)
           
  0.581
100284851
Bromodomain containing protein (447 aa)
           
  0.581
100272803
Gigantea2; Gigantea 1B (1160 aa)
       
 
  0.562
100147733
Gigantea1; Gigantea 1A; Gigantea isoform 1; Gigantea isoform 2 (1162 aa)
       
 
  0.562
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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