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STRINGSTRING
mads1 protein (Zea mays) - STRING interaction network
"mads1" - MADS transcription factor in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mads1MADS transcription factor; MADS1 (232 aa)    
Predicted Functional Partners:
GRMZM2G019863_P01
Flowering locus D (808 aa)
       
 
  0.901
103645994
Floricaula/leafy-like 2 (394 aa)
       
 
  0.791
GRMZM2G021642_P02
annotation not available (476 aa)
           
  0.741
zfl1
Zea floricaula/leafy1 (391 aa)
       
 
  0.739
100272803
Gigantea2; Gigantea 1B (1160 aa)
       
 
  0.730
PHYA1
Phytochrome A; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reducta [...] (1131 aa)
     
   
  0.722
ZCN15
ZCN15 (177 aa)
       
 
  0.719
100383162
RNA binding (735 aa)
           
  0.714
100194333
Histone deacetylase complex subunit SAP18; Uncharacterized protein (152 aa)
       
      0.696
100381502
Histone deacetylase complex subunit SAP18; Uncharacterized protein (175 aa)
       
      0.696
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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