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GRMZM2G171488_P02 protein (Zea mays) - STRING interaction network
"GRMZM2G171488_P02" - Transcription elongation factor SPT5 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G171488_P02Transcription elongation factor SPT5 (770 aa)    
Predicted Functional Partners:
103630545
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1622 aa)
     
 
  0.987
GRMZM2G423663_P01
Uncharacterized protein (454 aa)
     
 
  0.974
103646054
annotation not available (1065 aa)
     
 
  0.974
100284208
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (129 aa)
       
 
  0.945
100216909
Transcription initiation factor IIF beta subunit (272 aa)
     
 
  0.944
IDP825
DNA-directed RNA polymerases II IV and V subunit 3; DNA-directed RNA polymerase II 36 kDa polypeptide A; Uncharacterized protein (328 aa)
     
 
  0.938
GRMZM2G468367_P01
annotation not available (492 aa)
   
 
  0.906
GRMZM2G388453_P02
Uncharacterized protein (617 aa)
   
 
  0.906
GRMZM2G126913_P02
annotation not available (762 aa)
   
 
  0.906
GRMZM2G018558_P01
annotation not available (690 aa)
   
 
  0.906
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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