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STRINGSTRING
100273316 protein (Zea mays) - STRING interaction network
"100273316" - RNA binding (RRM/RBD/RNP motifs) family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100273316RNA binding (RRM/RBD/RNP motifs) family protein (475 aa)    
Predicted Functional Partners:
100277544
Splicing factor 3B subunit 1 (1280 aa)
     
 
  0.872
GRMZM2G117346_P01
Splicing factor 3B subunit 1 (1280 aa)
     
 
  0.872
100273898
Hydroxyproline-rich glycoprotein family protein; Male sterile45; Splicing factor 3A subunit 2; Uncharacterized protein (323 aa)
     
 
  0.842
100272589
Hydroxyproline-rich glycoprotein family protein; Splicing factor 3A subunit 2; Uncharacterized protein (317 aa)
     
 
  0.842
IDP2400
Inactive protein FRIGIDA (284 aa)
     
 
  0.758
GRMZM2G030659_P01
Putative DEAD-box ATP-dependent RNA helicase family protein (1065 aa)
     
 
  0.697
GRMZM2G122185_P01
annotation not available (425 aa)
     
 
  0.674
103643760
annotation not available (769 aa)
     
 
  0.674
GRMZM2G057394_P02
ATP-dependent RNA helicase DDX23; Uncharacterized protein ; Belongs to the DEAD box helicase family (758 aa)
     
 
  0.654
103647704
annotation not available (1450 aa)
     
   
  0.615
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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