• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
bif2 protein (Zea mays) - STRING interaction network
"bif2" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bif2annotation not available (460 aa)    
Predicted Functional Partners:
PIN1a
Auxin efflux carrier component; May act as a component of the auxin efflux carrier (601 aa)
       
 
  0.935
PIN1b
Auxin efflux carrier component; May act as a component of the auxin efflux carrier (595 aa)
       
 
  0.923
PIN1c
Auxin efflux carrier component; May act as a component of the auxin efflux carrier (597 aa)
       
 
  0.910
psei10
Cysteine proteinase inhibitor; Putative cystatin ; Belongs to the cystatin family. Phytocystatin subfamily (155 aa)
           
  0.872
pco126622
Peptidyl-prolyl isomerase; Uncharacterized protein (374 aa)
       
 
  0.807
pdk3
Phosphoinositide dependent protein kinase3 (504 aa)
       
 
0.790
BA1
Transcription factor bHLH83; Barren stalk1; Uncharacterized protein (219 aa)
           
  0.742
100194253
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (210 aa)
           
  0.730
RAMDAZC7
Cystatin-1 (135 aa)
           
  0.714
psei2
Cystatin2; Cysteine proteinase inhibitor; Putative cystatin ; Belongs to the cystatin family. Phytocystatin subfamily (134 aa)
           
  0.714
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]