STRINGSTRING
bif2 protein (Zea mays) - STRING interaction network
"bif2" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bif2Uncharacterized protein (460 aa)    
Predicted Functional Partners:
PIN1a
Putative auxin efflux carrier ; May act as a component of the auxin efflux carrier (601 aa)
       
 
  0.785
Zm.80210
Putative uncharacterized protein (504 aa)
       
0.784
BA1
Barren stalk1 (219 aa)
           
  0.721
KN-1
Homeotic protein knotted-1 ; Possible transcription factor that regulates genes involved in development. Mutations in KN-1 alter leaf development. Foci of cells along the lateral vein do not differentiate properly but continue to divide, forming knots. May participate in the switch from indeterminate to determinate cell fates. Probably binds to the DNA sequence 5’-TGAC-3’ (359 aa)
           
  0.720
Ra1
Hypothetical protein LOC100276104 (175 aa)
           
  0.716
ra2
Ramosa 2 (261 aa)
           
  0.713
PIN1b
Putative auxin efflux carrier ; May act as a component of the auxin efflux carrier (595 aa)
       
 
  0.711
PIN10a
Hypothetical protein LOC100383548 ; May act as a component of the auxin efflux carrier (686 aa)
       
 
  0.654
spi1
Sparse inflorescence 1 (216 aa)
           
  0.627
br2
Hypothetical protein LOC100384057 (1379 aa)
           
  0.580
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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