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GRMZM2G172065_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G172065_P01" - RING-H2 finger protein ATL46 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G172065_P01RING-H2 finger protein ATL46 (407 aa)    
Predicted Functional Partners:
GRMZM2G015067_P01
SURF1-like protein; Probably involved in the biogenesis of the COX complex (344 aa)
           
  0.548
GRMZM2G083689_P01
Nuclear cap-binding protein subunit 1 (866 aa)
     
   
  0.484
pco080890
Protein SCO1 homolog 1 mitochondrial (307 aa)
           
  0.473
GRMZM6G274034_P01
Cytochrome c oxidase assembly protein COX15 (290 aa)
     
   
  0.472
IDP712
Copper chaperone for superoxide dismutase (308 aa)
           
  0.459
GRMZM2G152925_P01
Cytochrome c oxidase subunit; Uncharacterized protein (172 aa)
           
  0.457
GRMZM2G139903_P02
Protein SCO1 homolog 2 mitochondrial (281 aa)
           
  0.447
GRMZM2G126408_P01
annotation not available (96 aa)
           
  0.447
100383389
Protein TPX2 (751 aa)
     
 
  0.435
103647702
annotation not available (837 aa)
     
 
  0.435
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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