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STRINGSTRING
GRMZM2G172152_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G172152_P01" - Cryptochrome-2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G172152_P01Cryptochrome-2 (654 aa)    
Predicted Functional Partners:
100279342
E3 ubiquitin-protein ligase COP1 (655 aa)
       
  0.981
GRMZM2G104920_P03
Ubiquitin ligase protein COP1 (693 aa)
       
  0.981
bHLH11
Transcription factor bHLH63; Putative HLH DNA-binding domain superfamily protein; Uncharacterized protein (352 aa)
       
 
  0.965
bhlh29
Transcription factor bHLH63 (350 aa)
       
 
  0.965
PHYA1
Phytochrome A; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reducta [...] (1131 aa)
     
 
  0.959
phyA1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1131 aa)
     
 
  0.959
cl68545_1
Putative timeless C-term domain and Homeodomain protein (1101 aa)
       
 
  0.923
bHLH86
Transcription factor bHLH76 (434 aa)
       
 
  0.900
bHLH151
Transcription factor bHLH76 (453 aa)
       
 
  0.900
100273233
Regulator of chromosome condensation2 (443 aa)
     
   
  0.895
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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