STRINGSTRING
cl11049_1 protein (Zea mays) - STRING interaction network
"cl11049_1" - LOC100282160 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl11049_1LOC100282160 (222 aa)    
Predicted Functional Partners:
Zm.17242
Hypothetical protein LOC100276920 (158 aa)
           
  0.459
vde1
Violaxanthin de-epoxidase (446 aa)
           
  0.420
GRMZM2G044557_P01
Hypothetical protein LOC100279294 (633 aa)
           
  0.420
GRMZM2G400470_P03
Hypothetical protein LOC100194322 (350 aa)
           
  0.416
GRMZM2G089696_P01
Hypothetical protein LOC100276396 (401 aa)
           
  0.406
Zm.21100
LOC100282782 (260 aa)
   
          0.401
mkkk10
Hypothetical protein LOC100383481 (599 aa)
           
  0.400
pza03092
Putative uncharacterized protein (629 aa)
           
  0.400
cl17799_1
Hypothetical protein LOC100272734 (600 aa)
           
  0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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