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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
cl11049_1 protein (Zea mays) - STRING interaction network
"cl11049_1" - CBS domain containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl11049_1CBS domain containing protein; Uncharacterized protein (222 aa)    
Predicted Functional Partners:
100283264
AAR2 protein family (399 aa)
           
  0.762
103638085
CDT1-like protein a chloroplastic (573 aa)
           
  0.759
pco115368
Uncharacterized protein (216 aa)
           
  0.705
GRMZM2G114650_P01
Uncharacterized protein (345 aa)
           
  0.705
mmp16
Pectate lyase (466 aa)
           
  0.704
GRMZM2G131912_P01
Pectate lyase (479 aa)
           
  0.704
tds919.17b
annotation not available (693 aa)
           
  0.703
103629547
Putative RING zinc finger domain superfamily protein (188 aa)
           
  0.703
103643720
annotation not available (432 aa)
           
  0.656
LIM5
LIM transcription factor; Zinc ion binding protein (504 aa)
           
  0.656
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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