STRINGSTRING
Zm.13920 protein (Zea mays) - STRING interaction network
"Zm.13920" - Putative uncharacterized protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.13920Putative uncharacterized protein (550 aa)    
Predicted Functional Partners:
GRMZM2G136522_P01
Hypothetical protein LOC100216789 (523 aa)
   
0.987
GRMZM5G822426_P02
Hypothetical protein LOC100193843 (459 aa)
   
  0.979
GRMZM2G166612_P01
Uncharacterized protein (670 aa)
     
  0.979
GRMZM2G135089_P01
Annotation not available (670 aa)
     
  0.979
Zm.6370
LOC100285724 (681 aa)
     
  0.979
GRMZM2G112659_P01
Hypothetical protein LOC100191407 (675 aa)
     
  0.979
GRMZM2G093436_P01
Putative uncharacterized protein (681 aa)
     
  0.979
GRMZM5G807639_P03
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (446 aa)
   
  0.969
pco128534b
Hypothetical protein LOC100192900 (606 aa)
   
  0.969
dla1
Dihydrolipoamide S-acetyltransferase 1; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (368 aa)
   
  0.969
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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