STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100216901B3 domain-containing transcription repressor VAL2 (961 aa)    
Predicted Functional Partners:
abi43
B3 domain-containing protein
      
 0.737
DOF7
annotation not available
      
 0.714
abi35
annotation not available
      
 0.686
103650873
annotation not available
      
 0.683
gpm623
Polycomb group protein EMBRYONIC FLOWER 2
      
 0.653
vef101a
Embryonic flower 2; VEF family protein
      
 0.653
IDP51
P-loop containing nucleoside triphosphate hydrolase superfamily protein
      
 0.652
103637982
Putative homeodomain-like transcription factor superfamily protein
   
 
 0.624
103629848
Cationic amino acid transporter 5
      
 0.589
hda108
Histone deacetylase ; Belongs to the histone deacetylase family. HD Type 1 subfamily
   
  
 0.548
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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