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STRINGSTRING
GRMZM2G172787_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G172787_P01" - DNA topoisomerase type IA core in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G172787_P01DNA topoisomerase type IA core; DNA topoisomerase (680 aa)    
Predicted Functional Partners:
100278570
Putative DUF1767 domain containing protein (430 aa)
     
 
  0.937
rad1
DNA repair endonuclease UVH1 (1851 aa)
   
 
  0.933
103654570
DEAD/DEAH box RNA helicase family protein (537 aa)
     
 
  0.880
GRMZM2G035068_P01
DEAD/DEAH box RNA helicase family protein (930 aa)
     
 
  0.880
GRMZM2G306348_P01
ATP-dependent DNA helicase Q-like 5 (1256 aa)
   
 
  0.864
GRMZM2G066565_P01
Uncharacterized protein (662 aa)
   
 
  0.863
GRMZM2G037954_P01
Uncharacterized protein (629 aa)
   
 
  0.863
umc2030
Increased DNA methylation 1 (1316 aa)
   
 
  0.845
100274706
ATP-dependent DNA helicase Q-like 4A (750 aa)
   
 
  0.845
GRMZM2G106732_P01
annotation not available (898 aa)
   
 
  0.845
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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