• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
imd1 protein (Zea mays) - STRING interaction network
"imd1" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
imd1annotation not available (135 aa)    
Predicted Functional Partners:
100284826
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit (438 aa)
   
 
  0.984
542698
Isocitrate dehydrogenase [NAD] regulatory subunit 3 mitochondrial; Isocitrate dehydrogenase subunit 1; Uncharacterized protein (377 aa)
   
 
0.965
GRMZM2G116872_P01
annotation not available (191 aa)
   
 
0.965
GRMZM2G006672_P02
Isocitrate dehydrogenase [NAD] regulatory subunit 3 mitochondrial (373 aa)
   
 
0.965
GRMZM2G324991_P03
annotation not available (503 aa)
   
 
  0.959
GRMZM2G118074_P01
annotation not available (467 aa)
   
 
  0.959
GRMZM2G007715_P01
annotation not available (629 aa)
   
 
  0.959
ndhK
Uncharacterized protein; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (448 aa)
   
   
  0.929
100216609
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit (331 aa)
   
 
  0.896
100283329
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit (331 aa)
   
 
  0.896
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (13%) [HD]