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STRINGSTRING
100274342 protein (Zea mays) - STRING interaction network
"100274342" - General transcription factor IIH subunit 2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100274342General transcription factor IIH subunit 2 (428 aa)    
Predicted Functional Partners:
100285960
DNA repair helicase UVH6 (758 aa)
     
 
  0.990
100192494
RNA polymerase II transcription factor B subunit 4 (294 aa)
     
 
  0.979
GRMZM2G147854_P01
RNA polymerase II transcription factor B subunit 2; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (451 aa)
     
 
  0.979
GRMZM2G055807_P02
annotation not available (767 aa)
     
 
  0.979
BSD10
Putative RNA polymerase II transcription factor B subunit 1-1 (600 aa)
     
 
  0.977
pco103361
Cyclin-H1-1; Belongs to the cyclin family (168 aa)
     
 
  0.962
GRMZM2G398736_P02
CDK-activating kinase assembly factor MAT1 family protein (194 aa)
     
 
  0.959
100284506
CDK-activating kinase assembly factor MAT1 family protein (194 aa)
     
 
  0.959
103632168
annotation not available (1531 aa)
     
 
  0.955
103639350
Transcription activator (531 aa)
       
 
  0.948
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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