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cl27985_1a protein (Zea mays) - STRING interaction network
"cl27985_1a" - Hypothetical protein LOC100193144 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl27985_1aHypothetical protein LOC100193144 (377 aa)    
Predicted Functional Partners:
GRMZM2G416426_P01
Putative uncharacterized protein adh1D (580 aa)
       
 
  0.816
Zm.17458
E3 ubiquitin-protein ligase HOS1-like (925 aa)
       
 
  0.816
Zm.12852
Uncharacterized protein (624 aa)
     
      0.667
bHLH82
DNA binding protein (219 aa)
       
 
  0.651
bHLH24
Hypothetical protein LOC100194372 (375 aa)
       
 
  0.633
bHLH139
Hypothetical protein LOC100381548 (393 aa)
       
 
  0.633
Zm.102913
Transcription factor SPEECHLESS-like (362 aa)
       
 
  0.633
Zm.13866
Myb-related protein Myb4 (260 aa)
       
 
  0.606
MYB41
R2R3MYB-domain protein Fragment (244 aa)
       
 
  0.606
Zm.98633
R2R3MYB-domain protein Fragment (294 aa)
       
 
  0.606
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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