STRINGSTRING
pco078615 protein (Zea mays) - STRING interaction network
"pco078615" - Hypothetical protein LOC100216776 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco078615Hypothetical protein LOC100216776 (364 aa)    
Predicted Functional Partners:
GRMZM2G145085_P01
Transcription initiation factor IIF subunit alpha-like (531 aa)
     
  0.946
pco081507
LOC100282440 (531 aa)
     
  0.946
GRMZM2G154366_P01
Uncharacterized protein (1215 aa)
     
  0.899
GRMZM2G099481_P01
Hypothetical protein LOC100279857 (969 aa)
     
  0.899
GRMZM2G049198_P01
Annotation not available (290 aa)
     
  0.741
rpoC1
DNA-directed RNA polymerase subunit beta’ (EC 2.7.7.6)(PEP)(Plastid-encoded RNA polymerase subunit beta’)(RNA polymerase subunit beta’); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (683 aa)
       
  0.740
rpoC2
DNA-directed RNA polymerase subunit beta’’ (EC 2.7.7.6)(PEP)(Plastid-encoded RNA polymerase subunit beta’’)(RNA polymerase subunit beta’’); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1527 aa)
       
  0.740
GRMZM5G808472_P01
Annotation not available (174 aa)
       
  0.740
GRMZM2G470305_P01
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (896 aa)
       
  0.740
GRMZM2G456895_P01
Annotation not available (237 aa)
       
  0.740
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (25%) [HD]