STRINGSTRING
pco100830a protein (Zea mays) - STRING interaction network
"pco100830a" - LOC100282356 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco100830aLOC100282356 (449 aa)    
Predicted Functional Partners:
ACC1
Acetyl-coenzyme A carboxylase (2325 aa)
       
      0.837
Zm.7590
Hypothetical protein LOC100193636 (2248 aa)
       
      0.837
Zm.85051
Acetyl CoA carboxylase Fragment (EC 6.4.1.2) (2325 aa)
       
      0.837
Zm.25447
Putative uncharacterized protein (866 aa)
     
  0.657
GRMZM2G132465_P01
RNA binding protein (454 aa)
       
0.628
GRMZM2G454261_P01
Annotation not available (104 aa)
       
  0.623
GRMZM2G376619_P01
Uncharacterized protein (266 aa)
       
  0.623
GRMZM2G172258_P01
Hypothetical protein LOC100273619 (702 aa)
     
      0.616
GRMZM2G158153_P01
Hypothetical protein LOC100193964 (706 aa)
     
      0.616
GRMZM2G139407_P01
Hypothetical protein LOC100193813 (497 aa)
     
   
  0.432
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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