• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G174667_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G174667_P01" - Ubiquitin-like-specific protease 1D in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G174667_P01Ubiquitin-like-specific protease 1D (424 aa)    
Predicted Functional Partners:
sumo2
Ubiquitin-like protein SMT3 (110 aa)
     
 
  0.804
100281934
Small ubiquitin-related modifier; SUMO1a protein; Ubiquitin-like protein SMT3; Uncharacterized protein (99 aa)
     
 
  0.804
SUMO1a
SUMO1a protein; Ubiquitin-like protein SMT3; Uncharacterized protein (99 aa)
     
 
  0.804
DSUL
Di-SUMO-like protein (250 aa)
     
 
  0.804
GRMZM2G337905_P01
ATP-dependent DNA helicase; Belongs to the helicase family (1954 aa)
     
 
  0.716
100381612
Structural maintenance of chromosomes protein 5 (1057 aa)
     
 
  0.692
AC207546.3_FGP004
annotation not available (510 aa)
     
 
  0.658
GRMZM6G348677_P01
SUMO-activating enzyme subunit 2 (100 aa)
     
 
  0.645
GRMZM2G129575_P01
annotation not available (236 aa)
     
 
  0.645
103630794
TATA-binding protein-associated factor BTAF1 (2031 aa)
     
 
  0.636
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]