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STRINGSTRING
100383211 protein (Zea mays) - STRING interaction network
"100383211" - E3 ubiquitin-protein ligase MBR2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100383211E3 ubiquitin-protein ligase MBR2 (663 aa)    
Predicted Functional Partners:
GRMZM2G176282_P02
EXS, C-terminal (449 aa)
           
  0.707
103640531
EXS (ERD1/XPR1/SYG1) family protein (422 aa)
           
  0.707
100283264
AAR2 protein family (399 aa)
           
  0.699
magi26728
Arginine/serine-rich splicing factor RSP41 isoform 1; Arginine/serine-rich splicing factor RSP41 isoform 2; Arginine/serine-rich splicing factor RSP41 isoform 3; Uncharacterized protein (255 aa)
       
 
  0.551
SRP1
Arginine/serine-rich splicing factor 1 variant 3 isoform 3; Uncharacterized protein (223 aa)
       
 
  0.551
542693
Serine/arginine-rich splicing factor RS31A (239 aa)
       
 
  0.551
IDP2556
Protein transport protein Sec24-like (1014 aa)
     
   
  0.550
100194158
Protein transport protein Sec24-like (1018 aa)
     
   
  0.550
103643720
annotation not available (432 aa)
       
 
  0.536
LIM5
LIM transcription factor; Zinc ion binding protein (504 aa)
       
 
  0.536
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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