STRINGSTRING
psb3 protein (Zea mays) - STRING interaction network
"psb3" - Photosystem II3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psb3Photosystem II3 (128 aa)    
Predicted Functional Partners:
GRMZM2G071450_P01
Plastocyanin ; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (155 aa)
     
   
  0.812
Zm.41417
Chlorophyll a/b-binding apoprotein CP24 precursor (248 aa)
     
   
  0.809
pco136292
LOC100282910 (148 aa)
     
        0.783
Lhcb5-1
Chlorophyll a/b-binding apoprotein CP26 precursor (283 aa)
     
   
  0.783
psa6
Photosystem I reaction center6 (134 aa)
     
   
  0.782
GRMZM2G010884_P01
Chlorophyll a-b binding protein 8 (267 aa)
     
   
  0.767
GRMZM2G329047_P01
Photosystem I reaction center subunit V (145 aa)
     
   
  0.743
IDP1438
Hypothetical protein LOC100273196 (388 aa)
     
   
  0.735
psb29
Photosystem II subunit29 (291 aa)
     
   
  0.665
Zm.28224
Photosystem I reaction center subunit II (236 aa)
     
   
  0.649
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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