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STRINGSTRING
LOC541975 protein (Zea mays) - STRING interaction network
"LOC541975" - Putative zinc finger protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC541975Putative zinc finger protein (1232 aa)    
Predicted Functional Partners:
GRMZM2G150952_P01
Putative plastid-lipid-associated protein 14 chloroplastic (646 aa)
     
 
  0.778
100282178
BHLH transcription factor; Uncharacterized protein (270 aa)
     
   
  0.727
abi49
Putative B3 DNA binding domain family protein (316 aa)
           
  0.710
100272565
B3 domain-containing transcription factor LEC2; Putative B3 DNA binding domain family protein; Uncharacterized protein (369 aa)
           
  0.710
GRMZM2G069630_P02
Putative HLH DNA-binding domain superfamily protein (213 aa)
       
 
  0.667
magi96141
BHLH transcription factor (252 aa)
       
 
  0.667
GRMZM2G169391_P01
Uncharacterized protein (96 aa)
           
  0.655
103650976
annotation not available (401 aa)
           
  0.655
AC232238.2_FGP008
Hemerythrin HHE cation-binding domain protein (374 aa)
           
  0.655
pco136360
Transcription factor bHLH47; Putative HLH DNA-binding domain superfamily protein; Uncharacterized protein (274 aa)
     
   
  0.638
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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