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tdsgR30F01 protein (Zea mays) - STRING interaction network
"tdsgR30F01" - RNA recognition motif-containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdsgR30F01RNA recognition motif-containing protein (190 aa)    
Predicted Functional Partners:
100273898
Hydroxyproline-rich glycoprotein family protein; Male sterile45; Splicing factor 3A subunit 2; Uncharacterized protein (323 aa)
     
 
  0.947
100272589
Hydroxyproline-rich glycoprotein family protein; Splicing factor 3A subunit 2; Uncharacterized protein (317 aa)
     
 
  0.947
100286340
PHD finger-like domain-containing protein 5A; Uncharacterized protein (157 aa)
     
 
  0.929
IDP2400
Inactive protein FRIGIDA (284 aa)
     
 
  0.910
100217051
Splicing factor SF3a60-like protein (504 aa)
     
 
  0.908
100282627
Zinc finger CCCH domain-containing protein 42 (298 aa)
     
 
  0.903
GRMZM2G429110_P01
LL-diaminopimelate aminotransferase chloroplastic (275 aa)
     
 
  0.903
100304231
Pre-mRNA-processing protein 40C (634 aa)
     
 
  0.902
100272396
Proline-rich spliceosome-associated (PSP) family protein (583 aa)
     
 
  0.894
GRMZM2G121354_P01
Uncharacterized protein (401 aa)
     
 
  0.894
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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