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STRINGSTRING
cl5397_1 protein (Zea mays) - STRING interaction network
"cl5397_1" - Beta-galactosidase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl5397_1Beta-galactosidase (850 aa)    
Predicted Functional Partners:
GRMZM2G029055_P01
annotation not available (599 aa)
       
      0.736
GRMZM2G515150_P01
Uncharacterized protein (333 aa)
         
  0.711
GRMZM2G166597_P01
annotation not available (565 aa)
         
  0.711
103644332
annotation not available (935 aa)
           
  0.711
GRMZM2G446648_P01
GC-rich sequence DNA-binding factor-like protein (761 aa)
           
  0.711
GRMZM2G404377_P01
MIF4G domain-containing protein / MA3 domain-containing protein (177 aa)
     
        0.630
GRMZM2G129065_P02
Protein trichome berefringence-like 7; Putative DUF231 domain containing family protein isoform 1; Putative DUF231 domain containing family protein isoform 2; Uncharacterized protein (426 aa)
           
  0.451
GRMZM2G013255_P01
Alpha-L-fucosidase 1 (485 aa)
 
     
  0.447
GRMZM2G164945_P01
annotation not available (317 aa)
 
     
  0.446
100192871
Alpha-L-fucosidase 1 (513 aa)
 
     
  0.442
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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