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cl5397_1 protein (Zea mays) - STRING interaction network
"cl5397_1" - Hypothetical protein LOC100194296 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl5397_1Hypothetical protein LOC100194296 (850 aa)    
Predicted Functional Partners:
Zm.10287
Probable methionine--tRNA ligase, mitochondrial (599 aa)
       
      0.894
Zm.2572
Uncharacterized protein (802 aa)
       
      0.647
Zm.151704
Probable methionine--tRNA ligase (802 aa)
       
      0.647
Zm.20172
Probable methionine--tRNA ligase (801 aa)
       
      0.647
GRMZM2G024509_P02
Annotation not available (599 aa)
              0.538
GRMZM5G879749_P02
Putative uncharacterized protein (505 aa)
       
  0.533
GRMZM5G812143_P02
Annotation not available (210 aa)
       
  0.533
GRMZM2G703293_P01
Carboxypeptidase (471 aa)
       
  0.533
GRMZM2G471269_P04
Serine carboxypeptidase 1 (501 aa)
       
  0.533
GRMZM2G433767_P02
Serine carboxypeptidase 1 (579 aa)
       
  0.533
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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