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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
sid1 protein (Zea mays) - STRING interaction network
"sid1" - Sister of indeterminate spikelet1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sid1Sister of indeterminate spikelet1 (535 aa)    
Predicted Functional Partners:
100279474
FRIGIDA-like protein; Belongs to the Frigida family (512 aa)
           
  0.808
100282840
D-aminoacyl-tRNA deacylase (177 aa)
           
  0.744
100382686
Thioredoxin Y1 chloroplastic (167 aa)
       
      0.742
103627408
annotation not available (472 aa)
           
  0.720
kan3
KANADI3; Kanadi3; Uncharacterized protein (468 aa)
       
      0.716
mwp1
Milkweed pod1; Myb-like DNA-binding domain, SHAQKYF class family protein (477 aa)
       
      0.716
kan1
Kanadi1 (458 aa)
       
      0.716
GRMZM2G124553_P01
Protein ABC transporter 1 mitochondrial (304 aa)
           
  0.700
GRMZM2G003417_P01
Uncharacterized protein (130 aa)
           
  0.700
EREB27
Putative AP2/EREBP transcription factor superfamily protein (239 aa)
           
  0.687
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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