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STRINGSTRING
100274275 protein (Zea mays) - STRING interaction network
"100274275" - Pentatricopeptide repeat protein PPR986-12 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100274275Pentatricopeptide repeat protein PPR986-12; Uncharacterized protein (553 aa)    
Predicted Functional Partners:
GRMZM2G025157_P01
annotation not available (625 aa)
           
  0.654
103635083
Pentatricopeptide repeat-containing protein mitochondrial (184 aa)
           
  0.587
GRMZM5G833563_P01
DNA polymerase lambda (POLL) (552 aa)
           
  0.548
IDP707
Pentatricopeptide repeat-containing protein (813 aa)
           
  0.546
mterf10
Transcription termination factor MTERF15 mitochondrial (346 aa)
       
 
  0.544
cl15714_1a
Pentatricopeptide repeat-containing protein chloroplastic (598 aa)
           
  0.541
mterf7
annotation not available (118 aa)
       
 
  0.521
mTRF12
mTERF transcription factor; mTERF family protein (574 aa)
       
 
  0.521
pco097658
Transcription initiation factor TFIID subunit 6; Putative TATA binding protein family protein; Uncharacterized protein (545 aa)
           
  0.521
GRMZM2G443776_P01
Pentatricopeptide repeat-containing protein (129 aa)
           
  0.516
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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