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STRINGSTRING
cha101 protein (Zea mays) - STRING interaction network
"cha101" - Chromatin complex subunit A101 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cha101Chromatin complex subunit A101 (779 aa)    
Predicted Functional Partners:
gtc102
FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (1055 aa)
     
 
  0.935
100304310
DNA helicase; Belongs to the MCM family (729 aa)
     
 
  0.917
100216891
DNA helicase; Belongs to the MCM family (729 aa)
     
 
  0.917
103638205
Helicase protein MOM1 (1990 aa)
     
 
0.915
103627994
annotation not available (571 aa)
     
 
  0.896
100193296
DNA helicase; Putative mini-chromosome maintenance (MCM) complex protein family ; Belongs to the MCM family (770 aa)
     
 
  0.887
ROA1
DNA replication licensing factor MCM3 homolog 2; Acts as a factor that allows the DNA to undergo a single round of replication per cell cycle. Required for DNA replication and cell proliferation (By similarity). May act as a component of the MCM complex which is the putative replicative helicase of the replication licensing system in eukaryotic cells (768 aa)
     
 
  0.887
CADR16
DNA polymerase epsilon subunit 3; Uncharacterized protein (175 aa)
     
 
  0.883
ddt3
annotation not available (255 aa)
     
 
  0.882
nfe101
DDT domain-containing protein (622 aa)
     
 
  0.882
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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