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Zm.21828 protein (Zea mays) - STRING interaction network
"Zm.21828" - Hypothetical protein LOC100278181 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.21828Hypothetical protein LOC100278181 (LOC100278181), mRNA (154 aa)    
Predicted Functional Partners:
GRMZM2G305196_P01
Ubiquitin-like protein SMT3 (110 aa)
       
  0.947
SUMO1a
LOC100281954 (99 aa)
       
  0.947
GRMZM2G053898_P02
LOC100281954 (99 aa)
       
  0.947
GRMZM2G337905_P01
Uncharacterized protein (1954 aa)
     
 
  0.884
GRMZM5G851029_P02
Annotation not available (173 aa)
     
 
  0.814
Zm.149003
Uncharacterized protein (332 aa)
     
 
  0.814
GRMZM2G337659_P01
Hypothetical protein LOC100381570 (1221 aa)
     
 
  0.814
Zm.148821
Uncharacterized protein (377 aa)
     
 
  0.814
phd17
Hypothetical protein LOC100272532 (876 aa)
     
 
  0.814
cl5002_1
Hypothetical protein LOC100217275 (860 aa)
     
 
  0.814
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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