STRINGSTRING
gtr1 protein (Zea mays) - STRING interaction network
"gtr1" - Hypothetical protein LOC100191548 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtr1Hypothetical protein LOC100191548 (531 aa)    
Predicted Functional Partners:
GRMZM2G116258_P01
Hypothetical protein LOC100193482 (474 aa)
 
  0.999
AC209206.3_FGP005
Annotation not available (81 aa)
     
 
  0.955
Zm.47553
glutamyl-tRNA synthetase, cytoplasmic (715 aa)
         
  0.955
GRMZM2G031761_P02
FLU (319 aa)
     
 
  0.947
Zm.26829
Hypothetical protein LOC100278396 (310 aa)
       
 
  0.937
GRMZM2G464328_P01
Hypothetical protein LOC100273248 (271 aa)
     
   
  0.903
PCO078116
Hypothetical protein LOC100193191 (310 aa)
       
 
  0.898
sum1
Siroheme uroporphyrinogen methyltransferase1 (423 aa)
 
 
 
  0.872
Zm.19950
Hypothetical protein LOC100217089 (389 aa)
 
 
 
  0.871
GRMZM2G147955_P01
Hypothetical protein LOC100278507 (297 aa)
     
 
  0.843
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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