STRINGSTRING
pco078735 protein (Zea mays) - STRING interaction network
"pco078735" - LOC100286004 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco078735LOC100286004 (491 aa)    
Predicted Functional Partners:
Zm.102456
Phosphoribosylanthranilate transferase (774 aa)
     
        0.538
GRMZM2G131769_P01
Grx_S17 - glutaredoxin subgroup II (499 aa)
       
      0.497
GRMZM2G090736_P01
Hypothetical protein LOC100272720 (597 aa)
       
      0.497
TUBB1
Tubulin beta-1 chain (Beta-1-tubulin); Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (446 aa)
     
        0.424
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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