STRINGSTRING
pco101674a protein (Zea mays) - STRING interaction network
"pco101674a" - LOC100282702 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco101674aLOC100282702 (227 aa)    
Predicted Functional Partners:
Zm.21952
Uncharacterized protein (229 aa)
     
  0.970
GRMZM2G089931_P01
Annotation not available (79 aa)
     
  0.970
Zm.26600
Hypothetical protein LOC100216726 (LOC100216726), mRNA (100 aa)
     
 
  0.755
GRMZM2G129913_P03
Hypothetical protein LOC100279325 (426 aa)
     
 
  0.755
TOP6A
Hypothetical protein LOC100273699 ; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (436 aa)
     
 
  0.755
RAD51A
DNA repair protein RAD51 homolog A (Rad51-like protein A)(RAD51A)(ZmRAD51a); Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA (By similarity). Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination (340 aa)
     
  0.650
RAD51B
DNA repair protein RAD51 homolog B (Rad51-like protein B)(RAD51B)(ZmRAD51b); Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA (By similarity). Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination (340 aa)
     
  0.650
GRMZM2G109618_P01
Hypothetical protein LOC100273470 (344 aa)
     
  0.634
GRMZM2G471335_P01
Uncharacterized protein (258 aa)
     
  0.608
GRMZM2G453619_P01
Annotation not available (125 aa)
     
  0.608
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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