STRINGSTRING
GRMZM2G178082_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G178082_P01" - Annotation not available in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G178082_P01Annotation not available (109 aa)    
Predicted Functional Partners:
GRMZM2G411893_P01
Uncharacterized protein (544 aa)
       
 
  0.786
Zm.139259
DIS3-like exonuclease 2 ; 3’-5’-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3’ end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3’ (1045 aa)
       
 
  0.786
GRMZM2G144965_P01
Annotation not available (145 aa)
       
 
  0.786
Zm.24451
Uncharacterized protein (783 aa)
       
 
  0.786
cl19897_1
Hypothetical protein LOC100194408 (935 aa)
       
 
  0.786
GRMZM5G890512_P01
Annotation not available (77 aa)
   
 
  0.719
GRMZM5G825110_P02
Hypothetical protein LOC100194409 (425 aa)
   
 
  0.719
cl9125_1
LOC100284438 (430 aa)
   
 
  0.719
GRMZM2G156983_P05
Phosphatidate cytidylyltransferase (370 aa)
   
 
  0.719
GRMZM2G148075_P01
Annotation not available (71 aa)
   
 
  0.719
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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