• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
chr167 protein (Zea mays) - STRING interaction network
"chr167" - SNF2 domain-containing protein CLASSY 4 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chr167SNF2 domain-containing protein CLASSY 4 (1321 aa)    
Predicted Functional Partners:
IDP264
Exonuclease 1 (826 aa)
     
 
  0.850
103654220
Separase (2092 aa)
     
   
  0.823
GRMZM2G421655_P01
annotation not available (233 aa)
   
 
  0.815
GRMZM2G121427_P01
annotation not available (439 aa)
   
 
  0.815
GRMZM2G427067_P01
annotation not available (885 aa)
     
 
  0.792
GRMZM2G157016_P01
Uncharacterized protein (314 aa)
     
 
  0.772
GRMZM2G306348_P01
ATP-dependent DNA helicase Q-like 5 (1256 aa)
   
 
  0.767
100037782
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1229 aa)
     
 
  0.767
umc2030
Increased DNA methylation 1 (1316 aa)
   
 
  0.756
100274706
ATP-dependent DNA helicase Q-like 4A (750 aa)
   
 
  0.756
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (9%) [HD]