STRINGSTRING
GRMZM2G178704_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G178704_P01" - Disease resistance protein RGA4 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G178704_P01Disease resistance protein RGA4 (411 aa)    
Predicted Functional Partners:
Zm.84680
Hypothetical protein LOC100278506 (191 aa)
           
  0.546
GRMZM2G171967_P01
RNA-binding protein (253 aa)
           
  0.545
GRMZM2G058450_P01
Hypothetical protein LOC100192826 (249 aa)
           
  0.545
GRMZM2G111872_P01
Hypothetical protein LOC100304361 (315 aa)
           
  0.533
GRMZM2G439168_P02
RING-H2 finger protein ATL51-like (440 aa)
           
  0.489
Zm.35718
Putative uncharacterized protein (382 aa)
           
  0.457
Zm.11704
Hypothetical protein LOC100278841 (176 aa)
           
  0.455
GRMZM2G168669_P01
Uncharacterized LOC103642122 (163 aa)
           
  0.455
GRMZM2G134857_P01
Hypothetical protein LOC100277899 (LOC100277899), mRNA (158 aa)
           
  0.455
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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