STRINGSTRING
pco110662 protein (Zea mays) - STRING interaction network
"pco110662" - LOC100281250 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco110662LOC100281250 (138 aa)    
Predicted Functional Partners:
TIDP2671
LOC100281814 (141 aa)
     
 
  0.940
Zm.18075
Salt tolerant protein (230 aa)
     
 
  0.940
atg6
Beclin 1 protein (499 aa)
       
      0.567
Zm.137320
Beclin-1-like protein (579 aa)
       
      0.567
GRMZM2G096486_P01
Vesicle-associated membrane protein 725 (220 aa)
     
   
  0.556
pco097999
Hypothetical protein LOC100191650 (222 aa)
     
   
  0.556
GRMZM2G054193_P01
Vesicle-associated membrane protein 721-like (220 aa)
     
   
  0.535
Zm.161852
LOC100284304 (190 aa)
           
  0.526
Zm.81393
dnaJ homolog subfamily B member 4 (348 aa)
           
  0.526
AC205677.3_FGP001
Uncharacterized protein (1142 aa)
       
      0.518
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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