Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Peptide deformylase 1B, chloroplastic; Removes the formyl group from the N-terminal Met of newly synthesized proteins (264 aa)
Predicted Functional Partners:
LOC100284384 (161 aa)
Hypothetical protein LOC100274150 (209 aa)
Annotation not available (340 aa)
Hypothetical protein LOC100275996 (LOC100275996), mRNA; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (310 aa)
Hypothetical protein LOC100274437 (314 aa)
60S ribosomal protein L17 (171 aa)
Hypothetical protein LOC100272465 (171 aa)
Uncharacterized protein (123 aa)
Hypothetical protein LOC100194089 (171 aa)
60S ribosomal protein L17 (323 aa)
Your Current Organism:
NCBI taxonomy Id: 4577 Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize