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Zm.6884 protein (Zea mays) - STRING interaction network
"Zm.6884" - Ribose-phosphate pyrophosphokinase 4 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.6884Ribose-phosphate pyrophosphokinase 4 (323 aa)    
Predicted Functional Partners:
mads52
Putative MADS-box transcription factor family protein (259 aa)
   
      0.841
gpm370
Hypothetical protein LOC100274407 (1052 aa)
   
 
  0.838
GRMZM2G367026_P01
Hypothetical protein LOC100382013 (822 aa)
   
 
  0.826
umc2770
Hypothetical protein LOC100383569 (545 aa)
   
   
  0.785
Zm.2572
Uncharacterized protein (802 aa)
   
   
  0.776
Zm.151704
Probable methionine--tRNA ligase (802 aa)
   
   
  0.776
Zm.20172
Probable methionine--tRNA ligase (801 aa)
   
   
  0.776
GRMZM2G049588_P01
Putative uncharacterized protein (732 aa)
   
   
  0.774
GRMZM2G009546_P01
Uncharacterized protein (543 aa)
   
 
  0.731
GRMZM2G382038_P01
UDP-glucuronic acid decarboxylase 6-like (349 aa)
         
  0.716
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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