STRINGSTRING
GRMZM2G180990_P02 protein (Zea mays) - STRING interaction network
"GRMZM2G180990_P02" - Ligatin in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G180990_P02Ligatin (211 aa)    
Predicted Functional Partners:
GRMZM2G068352_P02
Translation machinery-associated protein 22 (192 aa)
     
 
  0.981
cl66163_1
LOC100280975 (201 aa)
     
 
  0.981
TIF
Protein translation factor SUI1 homolog (Protein GOS2); Probably involved in translation (115 aa)
     
 
  0.908
gos1
GOS2 homolog (115 aa)
     
 
  0.908
TIDP3683
Protein translation factor SUI1 (185 aa)
     
 
  0.908
Zm.155268
Protein translation factor SUI1 homolog (91 aa)
     
 
  0.908
GRMZM2G017148_P01
Annotation not available (125 aa)
     
 
  0.908
GRMZM2G064390_P01
Hypothetical protein LOC100273603 (460 aa)
       
      0.652
GRMZM2G045668_P01
Uncharacterized LOC100273074 (343 aa)
       
      0.652
GRMZM2G386811_P01
Uncharacterized protein (67 aa)
   
        0.624
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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