STRINGSTRING
Zm.11891 protein (Zea mays) - STRING interaction network
"Zm.11891" - Helix-loop-helix DNA-binding domain containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.11891Helix-loop-helix DNA-binding domain containing protein (299 aa)    
Predicted Functional Partners:
wrky48
Hypothetical protein LOC100279570 (396 aa)
     
        0.774
Zm.4035
Hypothetical protein LOC100279841 (LOC100279841), mRNA (430 aa)
     
        0.470
pco096371
LOC100282665 (294 aa)
           
  0.410
Zm.26864
Hypothetical protein LOC100276793 (301 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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