STRINGSTRING
GRMZM2G302912_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G302912_P01" - Zinc finger, C3HC4 type family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G302912_P01Zinc finger, C3HC4 type family protein (198 aa)    
Predicted Functional Partners:
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
     
  0.964
Zm.124974
UBiQuitin family member (143 aa)
     
  0.964
Zm.137692
Uncharacterized LOC103638077 (165 aa)
     
  0.831
Zm.25284
Putative hect E3 ubiquitin ligase Fragment (1759 aa)
     
  0.793
Zm.26063
E3 ubiquitin-protein ligase UPL4 (1210 aa)
     
  0.793
GRMZM2G124297_P01
E3 ubiquitin-protein ligase UPL4-like (998 aa)
     
  0.793
Zm.84476
E3 ubiquitin-protein ligase UPL3-like (1877 aa)
     
  0.793
GRMZM5G866947_P03
Hypothetical protein LOC100192684 (148 aa)
       
  0.788
GRMZM5G862131_P01
Uncharacterized protein (153 aa)
       
  0.788
pco151017
Hypothetical protein LOC100191818 (157 aa)
       
  0.788
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (7%) [HD]