STRINGSTRING
Zm.36054 protein (Zea mays) - STRING interaction network
"Zm.36054" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.36054Uncharacterized protein (529 aa)    
Predicted Functional Partners:
GRMZM2G128938_P01
Serine/threonine-protein kinase ATR (1596 aa)
     
  0.980
GRMZM2G051138_P01
Hypothetical protein LOC100280210 (426 aa)
     
  0.977
GRMZM2G427067_P01
Uncharacterized protein (885 aa)
     
  0.969
IDP264
Hypothetical protein LOC100381439 (826 aa)
     
  0.962
GRMZM5G863846_P01
Putative DNA ligase 4 (147 aa)
     
 
  0.944
GRMZM5G851753_P01
Putative DNA ligase 4 (97 aa)
     
 
  0.944
Zm.26576
LOC100281554 ; Single-stranded DNA-dependent ATP-dependent helicase (681 aa)
     
  0.931
TERT
Telomerase reverse transcriptase catalytic subunit (1188 aa)
       
 
  0.925
Zm.102753
Mre11B protein (719 aa)
     
  0.921
Zm.12629
Double-strand break repair protein MRE11 (706 aa)
     
  0.921
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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