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Zm.98799 protein (Zea mays) - STRING interaction network
"Zm.98799" - U-box domain containing protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.98799U-box domain containing protein (429 aa)    
Predicted Functional Partners:
MubC5
Polyubiquitin (535 aa)
           
  0.562
GRMZM2G409726_P01
Polyubiquitin (533 aa)
           
  0.545
GRMZM2G027546_P01
Hypothetical protein LOC100384586 (520 aa)
       
 
  0.528
IDP190
Hypothetical protein LOC100192978 (288 aa)
           
  0.528
GRMZM2G429118_P01
Protein capI (487 aa)
           
  0.524
pco112381
Hypothetical protein LOC100273378 (198 aa)
           
  0.524
CAB48
Chlorophyll a-b binding protein 48, chloroplastic Precursor (LHCII type I CAB-48)(LHCP); The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (264 aa)
           
  0.524
GRMZM2G120329_P02
Serine/threonine-protein kinase RIO1 (532 aa)
           
  0.524
Zm.18886
Carbonic anhydrase (291 aa)
           
  0.524
Zm.86840
Probable mixed-linked glucan synthase 6 (945 aa)
           
  0.524
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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