STRINGSTRING
phd7 protein (Zea mays) - STRING interaction network
"phd7" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phd7Uncharacterized protein (387 aa)    
Predicted Functional Partners:
Zm.22064
Uncharacterized protein (1322 aa)
           
  0.721
Zm.10071
Uncharacterized LOC103642225 (1339 aa)
           
  0.721
Zm.12516
Hypothetical protein LOC100191692 (544 aa)
     
   
  0.544
Zm.110765
Uncharacterized LOC103642258 (710 aa)
           
  0.530
GRMZM2G152408_P01
Hypothetical protein LOC100273565 (517 aa)
     
   
  0.466
GRMZM2G103245_P01
Ubiquitin-protein ligase/ zinc ion binding protein (500 aa)
     
   
  0.466
SET102
SET domain-containing protein SET102 (513 aa)
           
  0.412
GRMZM2G052328_P01
Hypothetical protein LOC100276756 (404 aa)
           
  0.410
GRMZM2G164277_P02
MYND finger family protein (469 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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