• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
cl5418_1 protein (Zea mays) - STRING interaction network
"cl5418_1" - Putative Zinc finger C-x8-C-x5-C-x3-H type family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl5418_1Putative Zinc finger C-x8-C-x5-C-x3-H type family protein; Uncharacterized protein; Zinc finger C-x8-C-x5-C-x3-H type family protein (363 aa)    
Predicted Functional Partners:
GRMZM5G854199_P01
Transducin family protein / WD-40 repeat family protein (405 aa)
     
 
  0.746
100383086
Ubiquitinyl hydrolase 1; Ubiquitin carboxyl-terminal hydrolase (835 aa)
           
  0.653
GRMZM2G124560_P01
annotation not available (306 aa)
           
  0.548
100282533
F-box domain containing protein; F-box domain containing protein isoform 1; F-box domain containing protein isoform 2; F-box domain containing protein isoform 3; F-box domain containing protein isoform 4 (564 aa)
           
  0.548
vef101a
Embryonic flower 2; VEF family protein (626 aa)
           
  0.502
gpm623
Polycomb group protein EMBRYONIC FLOWER 2 (607 aa)
           
  0.502
103633227
annotation not available (1080 aa)
           
  0.422
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (12%) [HD]