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STRINGSTRING
pdk1 protein (Zea mays) - STRING interaction network
"pdk1" - Pyruvate, phosphate dikinase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdk1Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family (708 aa)    
Predicted Functional Partners:
mdh6
Malate dehydrogenase [NADP], chloroplastic; The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells (432 aa)
         
  0.882
magi29945
Phosphoglucan water dikinase chloroplastic (690 aa)
         
  0.857
pep1
Phosphoenolpyruvate carboxylase 1; Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (970 aa)
           
  0.847
LOC541622
Phosphoenolpyruvate carboxykinase [ATP] (667 aa)
   
   
  0.838
cah1
Carbonic anhydrase (456 aa)
           
  0.778
umc1110
Phosphoglycerate kinase ; Belongs to the phosphoglycerate kinase family (572 aa)
   
   
  0.750
542560
Plastidic 2-oxoglutarate/malate transporter (578 aa)
     
   
  0.715
100283267
Transmembrane BAX inhibitor motif protein-containing protein 4; Transmembrane BAX inhibitor motif-containing protein 4; Uncharacterized protein ; Belongs to the BI1 family (264 aa)
           
  0.714
GRMZM2G114570_P01
Putative methyltransferase PMT18 (636 aa)
           
  0.714
pep7
Phosphoenolpyruvate carboxylase (960 aa)
           
  0.707
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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