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STRINGSTRING
gpm18 protein (Zea mays) - STRING interaction network
"gpm18" - Zinc finger CCCH domain-containing protein 64 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm18Zinc finger CCCH domain-containing protein 64 (607 aa)    
Predicted Functional Partners:
100285583
Lariat debranching enzyme (407 aa)
     
 
  0.966
pco093291
Pre-mRNA-processing factor 19 homolog 2 (526 aa)
     
 
  0.910
GRMZM2G307567_P01
Uncharacterized protein (1364 aa)
     
 
  0.910
GRMZM2G132671_P01
annotation not available (264 aa)
     
 
  0.910
bhlh15
annotation not available (472 aa)
     
 
  0.910
100284255
Pre-mRNA-processing factor 19 homolog 2; Pre-mRNA-splicing factor 19; Uncharacterized protein (526 aa)
     
 
  0.910
GRMZM2G429842_P02
Subtilisin-like protease SBT1.8 (766 aa)
           
  0.785
pco128743
Subtilisin-like protease SBT1.8 (773 aa)
           
  0.785
103632335
annotation not available (614 aa)
           
  0.785
100191915
Uncharacterized protein (609 aa)
           
  0.785
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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