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cl7007_1 protein (Zea mays) - STRING interaction network
"cl7007_1" - Hypothetical protein LOC100272811 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl7007_1Hypothetical protein LOC100272811 (353 aa)    
Predicted Functional Partners:
Zm.96126
Myb2 (925 aa)
     
  0.991
Zm.95519
pre-mRNA-processing factor 17-like (572 aa)
       
  0.987
Zm.1204
pre-mRNA-splicing factor PRP17 (572 aa)
       
  0.987
AY106137
LOC100282926 (478 aa)
     
  0.987
GRMZM2G494600_P01
Uncharacterized protein (487 aa)
     
  0.985
Zm.35941
Uncharacterized protein (769 aa)
     
  0.985
GRMZM2G122185_P01
Crooked neck-like protein 1 (425 aa)
     
  0.983
GRMZM2G356894_P01
Hypothetical protein LOC100217127 (928 aa)
     
  0.981
Zm.123480
Hypothetical protein LOC100384244 (LOC100384244), mRNA (740 aa)
     
  0.981
GRMZM2G089417_P01
Annotation not available (159 aa)
     
  0.980
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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