• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mre11B protein (Zea mays) - STRING interaction network
"Mre11B" - MRE11B in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mre11BMRE11B (719 aa)    
Predicted Functional Partners:
GRMZM2G030128_P01
DNA repair protein RAD50 (1316 aa)
   
  0.997
GRMZM2G088258_P01
Uncharacterized protein (410 aa)
   
 
  0.990
FHA2
DNA damage signaling and repair protein (557 aa)
     
 
  0.972
IDP264
Exonuclease 1 (826 aa)
     
 
  0.948
GRMZM2G427067_P01
annotation not available (885 aa)
   
 
  0.940
cl55281_1
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (907 aa)
     
 
  0.935
pco139890
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase (681 aa)
     
 
  0.929
GRMZM2G360455_P01
Protein phosphatase 2C isoform gamma (907 aa)
     
 
  0.918
GRMZM2G340282_P01
annotation not available (632 aa)
     
 
  0.909
GRMZM2G128938_P01
annotation not available (1596 aa)
     
 
  0.909
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]