Groups of genes that are frequently observed in each other's genomic neighborhood.
Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Genes that are sometimes fused into single open reading frames.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
O-Glycosyl hydrolase family 17 protein; Glucan endo-1,3-beta-glucosidase 5; Putative O-Glycosyl hydrolase superfamily protein; Uncharacterized protein ; Belongs to the glycosyl hydrolase 17 family (481 aa)
Predicted Functional Partners:
PLASMODESMATA CALLOSE-BINDING PROTEIN 5 (210 aa)
O-methyltransferase ZRP4; May be involved in the O-methylation of suberin phenylpropanoid precursors (364 aa)
O-methyltransferase ZRP4; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family (364 aa)
O-methyltransferase ZRP4 ; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family (354 aa)
Your Current Organism:
NCBI taxonomy Id: 4577 Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize