STRINGSTRING
Zm.158735 protein (Zea mays) - STRING interaction network
"Zm.158735" - Sec12-like protein 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.158735Sec12-like protein 1 (371 aa)    
Predicted Functional Partners:
Zm.14470
Hypothetical protein LOC542172 (193 aa)
       
  0.959
GRMZM2G086636_P01
Hypothetical protein LOC100279736 (300 aa)
       
  0.959
GRMZM2G181536_P01
Uncharacterized protein (194 aa)
       
  0.807
sar1
Hypothetical protein LOC100279736 (193 aa)
       
  0.807
GRMZM5G874869_P01
Annotation not available (257 aa)
     
  0.777
GRMZM5G826171_P01
Annotation not available (221 aa)
     
  0.777
Zm.96972
Hypothetical protein LOC100278867 (1014 aa)
     
  0.777
GRMZM2G141735_P01
Hypothetical protein LOC100384066 (746 aa)
     
  0.777
GRMZM2G106140_P01
Hypothetical protein LOC100192686 (747 aa)
     
  0.777
Zm.126064
Protein transport protein SEC24-like (707 aa)
     
  0.777
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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